2012
10Mirroring co-evolving trees in the light of their topologies. Iman Hajirasouliha, Alexander Schönhuth, David de Juan, Alfonso Valencia, Süleyman Cenk Sahinalp. Bioinformatics (28): 1202-1208 (2012). Web SearchBibTeXDownload
9Accurate Demarcation of Protein Domain Linkers based on Structural Analysis of Linker Probable Region. Vivekanand Samant, Arvind Hulgeri, Alfonso Valencia, Ashish V. Tendulkar. CoRR (abs/1211.5520) (2012). Web SearchBibTeXDownload
2011
8Overview of the BioCreative III Workshop. Cecilia N. Arighi, Zhiyong Lu, Martin Krallinger, Kevin Bretonnel Cohen, W. John Wilbur, Alfonso Valencia, Lynette Hirschman, Cathy H. Wu. BMC Bioinformatics (12): S1 (2011). Web SearchBibTeXDownload
7Mirroring co-evolving trees in the light of their topologies. Iman Hajirasouliha, Alexander Schönhuth, David de Juan, Alfonso Valencia, Süleyman Cenk Sahinalp. CoRR (abs/1110.5704) (2011). Web SearchBibTeXDownload
2009
6SOA-Based Integration of Text Mining Services. Johannes Starlinger, Florian Leitner, Alfonso Valencia, Ulf Leser. SERVICES I 2009, 99-106. Web SearchBibTeXDownload
2008
5iProLINK: A Framework for Linking Text Mining with Ontology and Systems Biology. Zhang-Zhi Hu, K. Bretonnel Cohen, Lynette Hirschman, Alfonso Valencia, Hongfang Liu, Michelle G. Giglio, Cathy H. Wu. BIBM 2008, 467-472. Web SearchBibTeXDownload
2006
4Semantic Mining in Biomedicine (Introduction to the papers selected from the SMBM 2005 Symposium, Hinxton, U.K., April 2005). Udo Hahn, Alfonso Valencia. Bioinformatics (22): 643-644 (2006). Web SearchBibTeXDownload
2004
3SIGIR 2003 workshop on text analysis and search for bioinformatics. Eric W. Brown, William R. Hersh, Alfonso Valencia. SIGIR Forum (38): 31-36 (2004). Web SearchBibTeXDownload
2003
2Evaluation of annotation strategies using an entire genome sequence. Ioannis Iliopoulos, Sophia Tsoka, Miguel A. Andrade, Anton J. Enright, Mark Carroll, Patrick Poullet, Vassilis J. Promponas, Theodore Liakopoulos, Giorgos Palaios, Claude Pasquier, Stavros J. Hamodrakas, Javier Tamames, Asutosh T. Yagnik, Anna Tramontano, Damien Devos, Christian Blaschke, Alfonso Valencia, David Brett, David Martin, Christophe Leroy, Isidore Rigoutsos, Chris Sander, Christos A. Ouzounis. Bioinformatics (19): 717-726 (2003). Web SearchBibTeXDownload
2001
1Challenges for Intelligent Systems in Biology. Russ B. Altman, Alfonso Valencia, Satoru Miyano, Shoba Ranganathan. IEEE Intelligent Systems (16): 14-20 (2001). Web SearchBibTeXDownload
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