Bin Ma

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2011
63Study on human-simulated intelligence elevator controller - Based on SCM. Yong Shi, Kuan Huang, Changtao Wang, Bin Ma. EMEIT 2011, 4474-4477. Web SearchBibTeXDownload
62Application of D-S evidence theory in equipment fault diagnosis. Bin Ma, Di Wang, Changtao Wang, Tongying Guo, Zhonghua Han. ICNC 2011, 1620-1623. Web SearchBibTeXDownload
61Efficient estimation of the accuracy of the maximum likelihood method for ancestral state reconstruction. Bin Ma, Louxin Zhang. J. Comb. Optim. (21): 409-422 (2011). Web SearchBibTeXDownload
2010
60On the Longest Common Rigid Subsequence Problem. Nikhil Bansal, Moshe Lewenstein, Bin Ma, Kaizhong Zhang. Algorithmica (56): 270-280 (2010). Web SearchBibTeXDownload
59Voice conversion: From spoken vowels to singing vowels. Tin Lay Nwe, Minghui Dong, Paul Chan, Xi Wang, Bin Ma, Haizhou Li. ICME 2010, 1421-1426. Web SearchBibTeXDownload
58Ancient Chinese zither (guqin) music recovery with support vector machine. Qing Sun, Deyun Zhang, Yifeng Fan, Kaizhong Zhang, Bin Ma. JOCCH (3): 5 (2010). Web SearchBibTeXDownload
2009
57Amino Acid Classification and Hash Seeds for Homology Search. Weiming Li, Bin Ma, Kaizhong Zhang. BICoB 2009, 44-51. Web SearchBibTeXDownload
56On the similarity metric and the distance metric. Shihyen Chen, Bin Ma, Kaizhong Zhang. Theor. Comput. Sci. (410): 2365-2376 (2009). Web SearchBibTeXDownload
55Specialized Review Selection for Feature Rating Estimation. Chong Long, Jie Zhang, Minlie Huang, Xiaoyan Zhu, Ming Li, Bin Ma. Web Intelligence 2009, 214-221. Web SearchBibTeXDownload
2008
54ZOOM! Zillions of oligos mapped. Hao Lin, Zefeng Zhang, Michael Q. Zhang, Bin Ma, Ming Li. Bioinformatics (24): 2431-2437 (2008). Web SearchBibTeXDownload
53Information shared by many objects. Chong Long, Xiaoyan Zhu, Ming Li, Bin Ma. CIKM 2008, 1213-1220. Web SearchBibTeXDownload
52Complexities and Algorithms for Glycan Sequencing Using Tandem Mass Spectrometry. Baozhen Shan, Bin Ma, Kaizhong Zhang, Gilles Lajoie. J. Bioinformatics and Computational Biology (6): 77-91 (2008). Web SearchBibTeXDownload
51A new quartet approach for reconstructing phylogenetic trees: quartet joining method. Bin Ma, Lei Xin, Kaizhong Zhang. J. Comb. Optim. (16): 293-306 (2008). Web SearchBibTeXDownload
2007
50Complexities and Algorithms for Glycan Structure Sequencing using Tandem Mass Spectrometry. Baozhen Shan, Bin Ma, Kaizhong Zhang, Gilles Lajoie. APBC 2007, 297-306. Web SearchBibTeXDownload
49The Normalized Similarity Metric and Its Applications. Shihyen Chen, Bin Ma, Kaizhong Zhang. BIBM 2007, 172-180. Web SearchBibTeXDownload
48A New Quartet Approach for Reconstructing Phylogenetic Trees: Quartet Joining Method. Lei Xin, Bin Ma, Kaizhong Zhang. COCOON 2007, 40-50. Web SearchBibTeXDownload
47Deploying Wireless Sensor Networks under Limited Mobility Constraints. Sriram Chellappan, Wenjun Gu, Xiaole Bai, Dong Xuan, Bin Ma, Kaizhong Zhang. IEEE Trans. Mob. Comput. (6): 1142-1157 (2007). Web SearchBibTeXDownload
46On the complexity of the spaced seeds. Bin Ma, Ming Li. J. Comput. Syst. Sci. (73): 1024-1034 (2007). Web SearchBibTeXDownload
45Near optimal multiple alignment within a band in polynomial time. Bin Ma, Bin Ma, Lusheng Wang. J. Comput. Syst. Sci. (73): 997-1011 (2007). Web SearchBibTeXDownload
2006
44Improving the Sensitivity and Specificity of Protein Homology Search by Incorporating Predicted Secondary Structures. Bin Ma, Lieyu Wu, Kaizhong Zhang. J. Bioinformatics and Computational Biology (4): 709-720 (2006). Web SearchBibTeXDownload
43Prima: Peptide Robust Identification from Ms/ms Spectra. Jian Liu, Bin Ma, Ming Li. J. Bioinformatics and Computational Biology (4): 125-138 (2006). Web SearchBibTeXDownload
42Optimizing Multiple Spaced Seeds for Homology Search. Jinbo Xu, Daniel G. Brown, Ming Li, Bin Ma. Journal of Computational Biology (13): 1355-1368 (2006). Web SearchBibTeXDownload
41Superiority and complexity of the spaced seeds. Ming Li, Bin Ma, Louxin Zhang. SODA 2006, 444-453. Web SearchBibTeXDownload
2005
40PRIME: Peptide robust identification from MS/MS spectra. Jian Liu, Bin Ma, Ming Li. APBC 2005, 181-190. Web SearchBibTeXDownload
39tPatternHunter: gapped, fast and sensitive translated homology search . Derek Kisman, Ming Li, Bin Ma, Li Wang. Bioinformatics (21): 542-544 (2005). Web SearchBibTeXDownload
38On the Longest Common Rigid Subsequence Problem. Nikhil Bansal, Moshe Lewenstein, Bin Ma, Kaizhong Zhang. CPM 2005, 11-20. Web SearchBibTeXDownload
37Improving the Sensitivity and Specificity of Protein Homology Search by Incorporating Predicted Secondary Structures. Bin Ma, Lieyu Wu, Kaizhong Zhang. International Conference on Computational Science (2) 2005, 960-967. Web SearchBibTeXDownload
36An automata approach to match gapped sequence tags against protein database. Yonghua Han, Bin Ma, Kaizhong Zhang. Int. J. Found. Comput. Sci. (16): 487-497 (2005). Web SearchBibTeXDownload
35Spider: Software for Protein Identification from Sequence Tags with de Novo Sequencing Error. Yonghua Han, Bin Ma, Kaizhong Zhang. J. Bioinformatics and Computational Biology (3): 697-716 (2005). Web SearchBibTeXDownload
34An effective algorithm for peptide de novo sequencing from MS/MS spectra. Bin Ma, Kaizhong Zhang, Chengzhi Liang. J. Comput. Syst. Sci. (70): 418-430 (2005). Web SearchBibTeXDownload
2004
33An Automata Approach to Match Gapped Sequence Tags Against Protein Database. Yonghua Han, Bin Ma, Kaizhong Zhang. CIAA 2004, 167-177. Web SearchBibTeXDownload
32Optimizing Multiple Spaced Seeds for Homology Search. Jinbo Xu, Daniel G. Brown, Ming Li, Bin Ma. CPM 2004, 47-58. Web SearchBibTeXDownload
31SPIDER: Software for Protein Identification from Sequence Tags with De Novo Sequencing Error. Yonghua Han, Bin Ma, Kaizhong Zhang. CSB 2004, 206-215. Web SearchBibTeXDownload
30On spaced seeds for similarity search. Uri Keich, Ming Li, Bin Ma, John Tromp. Discrete Applied Mathematics (138): 253-263 (2004). Web SearchBibTeXDownload
29The similarity metric. Ming Li, Xin Chen, Xin Li, Bin Ma, Paul M. B. Vitányi. IEEE Transactions on Information Theory (50): 3250-3264 (2004). Web SearchBibTeXDownload
28A Tutorial of Recent Developments in the Seeding of Local Alignment. Daniel G. Brown, Ming Li, Bin Ma. J. Bioinformatics and Computational Biology (2): 819-842 (2004). Web SearchBibTeXDownload
27Patternhunter Ii: Highly Sensitive and Fast Homology Search. Ming Li, Bin Ma, Derek Kisman, John Tromp. J. Bioinformatics and Computational Biology (2): 417-440 (2004). Web SearchBibTeXDownload
26The longest common subsequence problem for arc-annotated sequences. Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang. J. Discrete Algorithms (2): 257-270 (2004). Web SearchBibTeXDownload
2003
25Greedy method for inferring tandem duplication history. Louxin Zhang, Bin Ma, Lusheng Wang, Ying Xu. Bioinformatics (19): 1497-1504 (2003). Web SearchBibTeXDownload
24An Effective Algorithm for the Peptide De Novo Sequencing from MS/MS Spectrum. Bin Ma, Kaizhong Zhang, Chengzhi Liang. CPM 2003, 266-277. Web SearchBibTeXDownload
23Alignment between Two Multiple Alignments. Bin Ma, Zhuozhi Wang, Kaizhong Zhang. CPM 2003, 254-265. Web SearchBibTeXDownload
22Distinguishing string selection problems. J. Kevin Lanctot, Ming Li, Bin Ma, Shaojiu Wang, Louxin Zhang. Inf. Comput. (185): 41-55 (2003). Web SearchBibTeXDownload
21The similarity metric. Ming Li, Xin Chen, Xin Li, Bin Ma, Paul M. B. Vitányi. SODA 2003, 863-872. Web SearchBibTeXDownload
2002
20DNACompress: fast and effective DNA sequence compression. Xin Chen, Ming Li, Bin Ma, John Tromp. Bioinformatics (18): 1696-1698 (2002). Web SearchBibTeXDownload
19PatternHunter: faster and more sensitive homology search. Bin Ma, John Tromp, Ming Li. Bioinformatics (18): 440-445 (2002). Web SearchBibTeXDownload
18On the closest string and substring problems. Ming Li, Bin Ma, Lusheng Wang. J. ACM (49): 157-171 (2002). Web SearchBibTeXDownload
17Finding Similar Regions in Many Sequences. Ming Li, Bin Ma, Lusheng Wang. J. Comput. Syst. Sci. (65): 73-96 (2002). Web SearchBibTeXDownload
16A General Edit Distance between RNA Structures. Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang. Journal of Computational Biology (9): 371-388 (2002). Web SearchBibTeX
15Computing similarity between RNA structures. Bin Ma, Lusheng Wang, Kaizhong Zhang. Theor. Comput. Sci. (276): 111-132 (2002). Web SearchBibTeXDownload
14Efficient Methods for Inferring Tandem Duplication History. Louxin Zhang, Bin Ma, Lusheng Wang. WABI 2002, 97-111. Web SearchBibTeXDownload
2001
13The similarity metric. Ming Li, Xin Chen, Xin Li, Bin Ma, Paul M. B. Vitányi. CoRR (cs.CC/0111054) (2001). Web SearchBibTeXDownload
12Edit distance between two RNA structures. Guohui Lin, Bin Ma, Kaizhong Zhang. RECOMB 2001, 211-220. Web SearchBibTeXDownload
2000
11On The Closest String and Substring Problems. Ming Li, Bin Ma, Lusheng Wang. CoRR (cs.CE/0002012) (2000). Web SearchBibTeXDownload
10The Longest Common Subsequence Problem for Arc-Annotated Sequences. Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang. CPM 2000, 154-165. Web SearchBibTeXDownload
9Fixed topology alignment with recombination. Lusheng Wang, Bin Ma, Ming Li. Discrete Applied Mathematics (104): 281-300 (2000). Web SearchBibTeXDownload
8From Gene Trees to Species Trees. Bin Ma, Ming Li, Louxin Zhang. SIAM J. Comput. (30): 729-752 (2000). Web SearchBibTeXDownload
7Near optimal multiple alignment within a band in polynomial time. Bin Ma, Bin Ma, Lusheng Wang. STOC 2000, 425-434. Web SearchBibTeXDownload
1999
6Computing Similarity between RNA Structures. Kaizhong Zhang, Lusheng Wang, Bin Ma. CPM 1999, 281-293. Web SearchBibTeXDownload
5Fitting Distances by Tree Metrics with Increment Error. Bin Ma, Lusheng Wang, Louxin Zhang. J. Comb. Optim. (3): 213-225 (1999). Web SearchBibTeXDownload
4Distinguishing String Selection Problems. J. Kevin Lanctot, Ming Li, Bin Ma, Shaojiu Wang, Louxin Zhang. SODA 1999, 633-642. Web SearchBibTeXDownload
3Finding Similar Regions in Many Strings. Ming Li, Bin Ma, Lusheng Wang. STOC 1999, 473-482. Web SearchBibTeXDownload
1998
2Fixed Topology Alignment with Recombination. Bin Ma, Lusheng Wang, Ming Li. CPM 1998, 174-188. Web SearchBibTeXDownload
1On reconstructing species trees from gene trees in term of duplications and losses. Bin Ma, Ming Li, Louxin Zhang. RECOMB 1998, 182-191. Web SearchBibTeXDownload
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