| 2012 |
| 142 | How to Reconstruct a Genome. Esko Ukkonen. MFCS 2012, 48. Web SearchBibTeXDownload |
| 2011 |
| 141 | Efficient algorithms for the discovery of gapped factors. Alberto Apostolico, Cinzia Pizzi, Esko Ukkonen. Algorithms for Molecular Biology (6): 5 (2011). Web SearchBibTeXDownload |
| 140 | Editors' Introduction. Marcus Hutter, Frank Stephan, Vladimir Vovk, Thomas Zeugmann. ALT 2011, 1-13. Web SearchBibTeXDownload |
| 139 | Fast scaffolding with small independent mixed integer programs. Leena Salmela, Veli Mäkinen, Niko Välimäki, Johannes Ylinen, Esko Ukkonen. Bioinformatics (27): 3259-3265 (2011). Web SearchBibTeXDownload |
| 138 | Finding Significant Matches of Position Weight Matrices in Linear Time. Cinzia Pizzi, Pasi Rastas, Esko Ukkonen. IEEE/ACM Trans. Comput. Biology Bioinform. (8): 69-79 (2011). Web SearchBibTeXDownload |
| 2010 |
| 137 | On the complexity of finding gapped motifs. Morris Michael, François Nicolas, Esko Ukkonen. J. Discrete Algorithms (8): 131-142 (2010). Web SearchBibTeXDownload |
| 136 | Geometric Point Pattern Matching in the Knuth-Morris-Pratt Way. Esko Ukkonen. J. UCS (16): 1902-1911 (2010). Web SearchBibTeXDownload |
| 2009 |
| 135 | MOODS: fast search for position weight matrix matches in DNA sequences. Janne Korhonen, Petri Martinmäki, Cinzia Pizzi, Pasi Rastas, Esko Ukkonen. Bioinformatics (25): 3181-3182 (2009). Web SearchBibTeXDownload |
| 134 | Motif Construction from High-Throughput SELEX Data. Esko Ukkonen. ISBRA 2009, 159. Web SearchBibTeXDownload |
| 133 | Efficient construction of maximal and minimal representations of motifs of a string. François Nicolas, Veli Mäkinen, Esko Ukkonen. Theor. Comput. Sci. (410): 2999-3005 (2009). Web SearchBibTeXDownload |
| 132 | Maximal and minimal representations of gapped and non-gapped motifs of a string. Esko Ukkonen. Theor. Comput. Sci. (410): 4341-4349 (2009). Web SearchBibTeXDownload |
| 2008 |
| 131 | A Computational Method for Reconstructing Gapless Metabolic Networks. Esa Pitkänen, Ari Rantanen, Juho Rousu, Esko Ukkonen. BIRD 2008, 288-302. Web SearchBibTeXDownload |
| 130 | An analytic and systematic framework for estimating metabolic flux ratios from 13C tracer experiments. Ari Rantanen, Juho Rousu, Paula Jouhten, Nicola Zamboni, Hannu Maaheimo, Esko Ukkonen. BMC Bioinformatics (9) (2008). Web SearchBibTeXDownload |
| 129 | The BREW workshop series: a stimulating experience in PhD education. Robert Giegerich, Alvis Brazma, Inge Jonassen, Esko Ukkonen, Martin Vingron. Briefings in Bioinformatics (9): 250-253 (2008). Web SearchBibTeXDownload |
| 128 | On the complexity of finding gapped motifs. Morris Michael, François Nicolas, Esko Ukkonen. CoRR (abs/0802.0314) (2008). Web SearchBibTeXDownload |
| 127 | Point Pattern Matching. Veli Mäkinen, Esko Ukkonen. Encyclopedia of Algorithms 2008. Web SearchBibTeXDownload |
| 126 | Multidimensional String Matching. Juha Kärkkäinen, Esko Ukkonen. Encyclopedia of Algorithms 2008. Web SearchBibTeXDownload |
| 125 | ReMatch: a web-based tool to construct, store and share stoichiometric metabolic models with carbon maps for metabolic flux analysis. Esa Pitkänen, Arto Åkerlund, Ari Rantanen, Paula Jouhten, Esko Ukkonen. J. Integrative Bioinformatics (5) (2008). Web SearchBibTeXDownload |
| 124 | Fast profile matching algorithms - A survey. Cinzia Pizzi, Esko Ukkonen. Theor. Comput. Sci. (395): 137-157 (2008). Web SearchBibTeXDownload |
| 2007 |
| 123 | Fast Search Algorithms for Position Specific Scoring Matrices. Cinzia Pizzi, Pasi Rastas, Esko Ukkonen. BIRD 2007, 239-250. Web SearchBibTeXDownload |
| 122 | Probabilistic modeling and machine learning in structural and systems biology. Samuel Kaski, Juho Rousu, Esko Ukkonen. BMC Bioinformatics (8) (2007). Web SearchBibTeXDownload |
| 121 | Structural Analysis of Gapped Motifs of a String. Esko Ukkonen. MFCS 2007, 681-690. Web SearchBibTeXDownload |
| 120 | Haplotype Inference Via Hierarchical Genotype Parsing. Pasi Rastas, Esko Ukkonen. WABI 2007, 85-97. Web SearchBibTeXDownload |
| 2006 |
| 119 | Planning optimal measurements of isotopomer distributions for estimation of metabolic fluxes. Ari Rantanen, Taneli Mielikäinen, Juho Rousu, Hannu Maaheimo, Esko Ukkonen. Bioinformatics (22): 1198-1206 (2006). Web SearchBibTeXDownload |
| 118 | The complexity of maximum matroid-greedoid intersection and weighted greedoid maximization, . Taneli Mielikäinen, Esko Ukkonen. Discrete Applied Mathematics (154): 684-691 (2006). Web SearchBibTeXDownload |
| 117 | Equivalence of Metabolite Fragments and Flow Analysis of Isotopomer Distributions for Flux Estimation. Ari Rantanen, Hannu Maaheimo, Esa Pitkänen, Juho Rousu, Esko Ukkonen. T. Comp. Sys. Biology 2006, 198-220. Web SearchBibTeXDownload |
| 116 | On size reduction techniques for multitape automata. Hellis Tamm, Matti Nykänen, Esko Ukkonen. Theor. Comput. Sci. (363): 234-246 (2006). Web SearchBibTeXDownload |
| 2005 |
| 115 | Optimization of cDNA-AFLP experiments using genomic sequence data. Teemu Kivioja, Mikko Arvas, Markku Saloheimo, Merja Penttilä, Esko Ukkonen. Bioinformatics (21): 2573-2579 (2005). Web SearchBibTeXDownload |
| 114 | Size Reduction of Multitape Automata. Hellis Tamm, Matti Nykänen, Esko Ukkonen. CIAA 2005, 307-318. Web SearchBibTeXDownload |
| 113 | Planning isotopomer measurements for estimation of metabolic fluxes. Ari Rantanen, Taneli Mielikäinen, Juho Rousu, Esko Ukkonen. German Conference on Bioinformatics 2005, 177-191. Web SearchBibTeXDownload |
| 112 | Transposition invariant string matching. Veli Mäkinen, Gonzalo Navarro, Esko Ukkonen. J. Algorithms (56): 124-153 (2005). Web SearchBibTeXDownload |
| 111 | Finding Feasible Pathways in Metabolic Networks. Esa Pitkänen, Ari Rantanen, Juho Rousu, Esko Ukkonen. Panhellenic Conference on Informatics 2005, 123-133. Web SearchBibTeXDownload |
| 110 | Sequential and indexed two-dimensional combinatorial template matching allowing rotations. Kimmo Fredriksson, Gonzalo Navarro, Esko Ukkonen. Theor. Comput. Sci. (347): 239-275 (2005). Web SearchBibTeXDownload |
| 109 | A Hidden Markov Technique for Haplotype Reconstruction. Pasi Rastas, Mikko Koivisto, Heikki Mannila, Esko Ukkonen. WABI 2005, 140-151. Cited by 25Web SearchBibTeXDownload |
| 2004 |
| 108 | Local Approximate 3D Matching of Proteins in Viral Cryo-EM Density Maps. Stefan Burkhardt, Kimmo Fredriksson, Tuomas Ojamies, Janne Ravantti, Esko Ukkonen. 3DPVT 2004, 979-986. Web SearchBibTeXDownload |
| 107 | Hidden Markov Modelling Techniques for Haplotype Analysis. Mikko Koivisto, Teemu Kivioja, Heikki Mannila, Pasi Rastas, Esko Ukkonen. ALT 2004, 37-52. Cited by 3Web SearchBibTeXDownload |
| 106 | Size Reduction of Multitape Automata. Hellis Tamm, Matti Nykänen, Esko Ukkonen. CIAA 2004, 329-330. Web SearchBibTeXDownload |
| 105 | The Computational Complexity of Orientation Search Problems in Cryo-Electron Microscopy. Taneli Mielikäinen, Janne Ravantti, Esko Ukkonen. CoRR (cs.DS/0406043) (2004). Web SearchBibTeXDownload |
| 104 | The Complexity of Maximum Matroid-Greedoid Intersection and Weighted Greedoid Maximization. Taneli Mielikäinen, Esko Ukkonen. CoRR (cs.DS/0405094) (2004). Web SearchBibTeXDownload |
| 103 | The Computational Complexity of Orientation Search in Cryo-Electron Microscopy. Taneli Mielikäinen, Janne Ravantti, Esko Ukkonen. International Conference on Computational Science 2004, 231-238. Web SearchBibTeXDownload |
| 102 | Bideterministic automata and minimal representations of regular languages. Hellis Tamm, Esko Ukkonen. Theor. Comput. Sci. (328): 135-149 (2004). Web SearchBibTeXDownload |
| 101 | Recombination Systems. Mikko Koivisto, Pasi Rastas, Esko Ukkonen. Theory Is Forever 2004, 159-169. Web SearchBibTeXDownload |
| 2003 |
| 100 | Approximate Matching of Run-Length Compressed Strings. Veli Mäkinen, Esko Ukkonen, Esko Ukkonen. Algorithmica (35): 347-369 (2003). Web SearchBibTeXDownload |
| 99 | Bideterministic Automata and Minimal Representations of Regular Languages. Hellis Tamm, Esko Ukkonen. CIAA 2003, 61-71. Web SearchBibTeXDownload |
| 98 | A Method for Estimating Metabolic Fluxes from Incomplete Isotopomer Information. Juho Rousu, Ari Rantanen, Hannu Maaheimo, Esa Pitkänen, Katja Saarela, Esko Ukkonen. CMSB 2003, 88-103. Web SearchBibTeXDownload |
| 97 | Sweepline the Music!. Esko Ukkonen, Kjell Lemström, Veli Mäkinen. Computer Science in Perspective 2003, 330-342. Web SearchBibTeXDownload |
| 96 | Design and implementation of a string database query language. Gösta Grahne, Raul Hakli, Matti Nykänen, Hellis Tamm, Esko Ukkonen. Inf. Syst. (28): 311-337 (2003). Web SearchBibTeXDownload |
| 95 | The C-BRAHMS project. Kjell Lemström, Veli Mäkinen, Anna Pienimäki, M. Turkia, Esko Ukkonen. ISMIR 2003. Web SearchBibTeXDownload |
| 94 | Geometric algorithms for transposition invariant content based music retrieval. Esko Ukkonen, Kjell Lemström, Veli Mäkinen. ISMIR 2003. Web SearchBibTeXDownload |
| 93 | Approximate string matching on Ziv-Lempel compressed text. Juha Kärkkäinen, Gonzalo Navarro, Esko Ukkonen. J. Discrete Algorithms (1): 313-338 (2003). Web SearchBibTeXDownload |
| 92 | An MDL Method for Finding Haplotype Blocks and for Estimating the Strength of Haplotype Block Boundaries. Mikko Koivisto, Markus Perola, T. Varilo, W. Hennah, J. Ekelund, Margus Lukk, L. Peltonen, Esko Ukkonen, Heikki Mannila. Pacific Symposium on Biocomputing 2003, 502-513. Cited by 61Web SearchBibTeXDownload |
| 91 | Algorithms for Transposition Invariant String Matching. Veli Mäkinen, Gonzalo Navarro, Esko Ukkonen. STACS 2003, 191-202. Web SearchBibTeXDownload |
| 90 | Matching Numeric Strings under Noise. Veli Mäkinen, Gonzalo Navarro, Esko Ukkonen. Stringology 2003, 99-110. Web SearchBibTeXDownload |
| 2002 |
| 89 | Optimal Exact and Fast Approximate Two Dimensional Pattern Matching Allowing Rotations. Kimmo Fredriksson, Gonzalo Navarro, Esko Ukkonen. CPM 2002, 235-248. Web SearchBibTeXDownload |
| 88 | Local Similarity Based Point-Pattern Matching. Veli Mäkinen, Esko Ukkonen. CPM 2002, 115-132. Web SearchBibTeXDownload |
| 87 | Correlating gene promoters and expression in gene disruption experiments. Kimmo Palin, Esko Ukkonen, Alvis Brazma, Jaak Vilo. ECCB 2002, 172-180. Web SearchBibTeX |
| 86 | Online timestamped text indexing. Amihood Amir, Gad M. Landau, Esko Ukkonen. Inf. Process. Lett. (82): 253-259 (2002). Web SearchBibTeXDownload |
| 85 | Assigning probes into a small number of pools separable by electrophoresis. Teemu Kivioja, Mikko Arvas, Kari Kataja, Merja Penttilä, Hans Söderlund, Esko Ukkonen. ISMB 2002, 199-206. Web SearchBibTeX |
| 84 | The Exact Path Length Problem. Matti Nykänen, Esko Ukkonen. J. Algorithms (42): 41-53 (2002). Web SearchBibTeXDownload |
| 83 | Finding Founder Sequences from a Set of Recombinants. Esko Ukkonen. WABI 2002, 277-286. Web SearchBibTeXDownload |
| 2001 |
| 82 | Approximate Matching of Run-Length Compressed Strings. Veli Mäkinen, Esko Ukkonen, Esko Ukkonen. CPM 2001, 31-49. Web SearchBibTeXDownload |
| 81 | The Complexity of Maximum Matroid-Greedoid Intersection. Taneli Mielikäinen, Esko Ukkonen. FCT 2001, 535-540. Web SearchBibTeXDownload |
| 80 | Faster template matching without FFT. Kimmo Fredriksson, Esko Ukkonen. ICIP (1) 2001, 678-681. Web SearchBibTeXDownload |
| 2000 |
| 79 | Approximate String Matching over Ziv-Lempel Compressed Text. Juha Kärkkäinen, Gonzalo Navarro, Esko Ukkonen. CPM 2000, 195-209. Web SearchBibTeXDownload |
| 78 | An Index for Two Dimensional String Matching Allowing Rotations. Kimmo Fredriksson, Gonzalo Navarro, Esko Ukkonen. IFIP TCS 2000, 59-75. Web SearchBibTeXDownload |
| 77 | Mining for Putative Regulatory Elements in the Yeast Genome Using Gene Expression Data. Jaak Vilo, Alvis Brazma, Inge Jonassen, Alan J. Robinson, Esko Ukkonen. ISMB 2000, 384-394. Web SearchBibTeXDownload |
| 76 | Combinatorial Methods for Approximate Pattern Matching under Rotations and Translations in 3D Arrays. Kimmo Fredriksson, Esko Ukkonen. SPIRE 2000, 96-104. Web SearchBibTeXDownload |
| 75 | Toward Complete Genome Data Mining in Computational Biology. Esko Ukkonen. SWAT 2000, 20-21. Web SearchBibTeXDownload |
| 1999 |
| 74 | Term Frequency-Based Identification of FAQ-Articles. Kai Korpimies, Esko Ukkonen. CoLIS 1999. Web SearchBibTeX |
| 73 | Reasoning about Strings in Databases. Gösta Grahne, Matti Nykänen, Esko Ukkonen. J. Comput. Syst. Sci. (59): 116-162 (1999). Web SearchBibTeXDownload |
| 72 | Implementing a Declarative String Query Language with String Restructuring. Raul Hakli, Matti Nykänen, Hellis Tamm, Esko Ukkonen. PADL 1999, 179-195. Web SearchBibTeXDownload |
| 71 | Combinatorial methods for approximate image matching under translations and rotations. Kimmo Fredriksson, Esko Ukkonen. Pattern Recognition Letters (20): 1249-1258 (1999). Web SearchBibTeXDownload |
| 70 | Two- and Higher-Dimensional Pattern Matching in Optimal Expected Time. Juha Kärkkäinen, Esko Ukkonen. SIAM J. Comput. (29): 571-589 (1999). Web SearchBibTeXDownload |
| 69 | Finding Paths with the Right Cost. Matti Nykänen, Esko Ukkonen. STACS 1999, 345-355. Web SearchBibTeXDownload |
| 1998 |
| 68 | Term Weighting in Query-Based Document Clustering (Extended Abstract). Kai Korpimies, Esko Ukkonen. ADBIS 1998, 151-153. Web SearchBibTeXDownload |
| 67 | A Rotation Invariant Filter for Two-Dimensional String Matching. Kimmo Fredriksson, Esko Ukkonen. CPM 1998, 118-125. Web SearchBibTeXDownload |
| 66 | Searching for General Documents. Kai Korpimies, Esko Ukkonen. FQAS 1998, 203-214. Web SearchBibTeXDownload |
| 65 | Predicting gene regulatory elements from their expression data in the complete yeast genome. Alvis Brazma, Inge Jonassen, Jaak Vilo, Esko Ukkonen. German Conference on Bioinformatics 1998. Web SearchBibTeX |
| 64 | Pattern Discovery in Biosequences. Alvis Brazma, Inge Jonassen, Jaak Vilo, Esko Ukkonen. ICGI 1998, 257-270. Web SearchBibTeXDownload |
| 1997 |
| 63 | Finding transcription factor binding site combinations in the yeast genome. Alvis Brazma, Jaak Vilo, Esko Ukkonen. German Conference on Bioinformatics 1997, 57-59. Web SearchBibTeX |
| 62 | Data Mining for Regulatory Elements in Yeast Genome. Alvis Brazma, Jaak Vilo, Esko Ukkonen, Kimmo Valtonen. ISMB 1997, 65-74. Web SearchBibTeXDownload |
| 61 | On the Equivalence Problem for E-Pattern Languages. Enno Ohlebusch, Esko Ukkonen. Theor. Comput. Sci. (186): 231-248 (1997). Web SearchBibTeXDownload |
| 1996 |
| 60 | Sparse Suffix Trees. Juha Kärkkäinen, Esko Ukkonen. COCOON 1996, 219-230. Web SearchBibTeXDownload |
| 59 | Discovering Unbounded Unions of Regular Pattern Languages from Positive Examples (Extended Abstract). Alvis Brazma, Esko Ukkonen, Jaak Vilo. ISAAC 1996, 95-104. Web SearchBibTeXDownload |
| 58 | Discovering Patterns and Subfamilies in Biosequences. Alvis Brazma, Inge Jonassen, Esko Ukkonen, Jaak Vilo. ISMB 1996, 34-43. Web SearchBibTeXDownload |
| 57 | On the Equivalence Problem for E-Pattern Languages. Enno Ohlebusch, Esko Ukkonen. MFCS 1996, 457-468. Web SearchBibTeXDownload |
| 56 | A Comparison of Approximate String Matching Algorithms. Petteri Jokinen, Jorma Tarhio, Esko Ukkonen. Softw., Pract. Exper. (26): 1439-1458 (1996). Web SearchBibTeXDownload |
| 1995 |
| 55 | On-Line Construction of Suffix Trees. Esko Ukkonen. Algorithmica (14): 249-260 (1995). Web SearchBibTeXDownload |
| 54 | MDL learning of unions of simple pattern languages from positive examples. Pekka Kilpeläinen, Heikki Mannila, Esko Ukkonen. EuroCOLT 1995, 252-260. Cited by 24Web SearchBibTeXDownload |
| 53 | Editor's Foreword. Fan Chung Graham, Michael A. Palis, David S. L. Wei. Nord. J. Comput. (2): 1-2 (1995). Web SearchBibTeX |
| 1994 |
| 52 | A Geometric Approach to Feature Selection. Tapio Elomaa, Esko Ukkonen. ECML 1994, 351-354. Web SearchBibTeXDownload |
| 51 | An ALgorithm for Learning Hierarchical Classifiers. Jyrki Kivinen, Heikki Mannila, Esko Ukkonen, Jaak Vilo. ECML 1994, 375-378. Cited by 1Web SearchBibTeXDownload |
| 50 | Finding Lowest Common Ancestors in Arbitrarily Directed Trees. Matti Nykänen, Esko Ukkonen. Inf. Process. Lett. (50): 307-310 (1994). Web SearchBibTeXDownload |
| 49 | Reasoning about Strings in Databases. Gösta Grahne, Matti Nykänen, Esko Ukkonen. PODS 1994, 303-312. Web SearchBibTeXDownload |
| 48 | Two and Higher Dimensional Pattern Matching in Optimal Expected Time. Juha Kärkkäinen, Esko Ukkonen. SODA 1994, 715-723. Web SearchBibTeXDownload |
| 1993 |
| 47 | Approximate String Matching with Suffix Automata. Esko Ukkonen, Derick Wood. Algorithmica (10): 353-364 (1993). Web SearchBibTeXDownload |
| 46 | Approximate String-Matching over Suffix Trees. Esko Ukkonen. CPM 1993, 228-242. Web SearchBibTeXDownload |
| 45 | Approximate Boyer-Moore String Matching. Jorma Tarhio, Esko Ukkonen. SIAM J. Comput. (22): 243-260 (1993). Web SearchBibTeXDownload |
| 1992 |
| 44 | Learning Hierarchical Rule Sets. Jyrki Kivinen, Heikki Mannila, Esko Ukkonen. COLT 1992, 37-44. Cited by 19Web SearchBibTeXDownload |
| 43 | Constructing Suffix Trees On-Line in Linear Time. Esko Ukkonen. IFIP Congress (1) 1992, 484-492. Web SearchBibTeX |
| 42 | Approximate String Matching with q-grams and Maximal Matches. Esko Ukkonen. Theor. Comput. Sci. (92): 191-211 (1992). Web SearchBibTeXDownload |
| 1991 |
| 41 | Two Algorithms for Approximate String Matching in Static Texts. Petteri Jokinen, Esko Ukkonen. MFCS 1991, 240-248. Web SearchBibTeXDownload |
| 1990 |
| 40 | A Linear-Time Algorithm for Finding Approximate Shortest Common Superstrings. Esko Ukkonen. Algorithmica (5): 313-323 (1990). Web SearchBibTeXDownload |
| 39 | Unifications, Deunifications, and Their Complexity. Heikki Mannila, Esko Ukkonen. BIT (30): 599-619 (1990). Cited by 1Web SearchBibTeX |
| 38 | Boyer-Moore Approach to Approximate String Matching (Extended Abstract). Jorma Tarhio, Esko Ukkonen. SWAT 1990, 348-359. Web SearchBibTeXDownload |
| 1988 |
| 37 | Time Parameter and Arbitrary Deunions in the Set Union Problem. Heikki Mannila, Esko Ukkonen. SWAT 1988, 34-42. Cited by 6Web SearchBibTeXDownload |
| 36 | A Greedy Approximation Algorithm for Constructing Shortest Common Superstrings. Jorma Tarhio, Esko Ukkonen. Theor. Comput. Sci. (57): 131-145 (1988). Web SearchBibTeXDownload |
| 1987 |
| 35 | Flow Analysis of Prolog Programs. Heikki Mannila, Esko Ukkonen. SLP 1987, 205-214. Cited by 50Web SearchBibTeX |
| 1986 |
| 34 | The Set Union Problem with Backtracking. Heikki Mannila, Esko Ukkonen. ICALP 1986, 236-243. Cited by 13Web SearchBibTeXDownload |
| 33 | On the Complexity of Unification Sequences. Heikki Mannila, Esko Ukkonen. ICLP 1986, 122-133. Cited by 13Web SearchBibTeXDownload |
| 32 | A Greedy Algorithm for Constructing Shortest Common Superstrings. Jorma Tarhio, Esko Ukkonen. MFCS 1986, 602-610. Web SearchBibTeXDownload |
| 31 | A Greedy Algorithm for Constructing Shortest Common Substrings. Jorma Tarhio, Esko Ukkonen. MFCS 1986, 602-610. Web SearchBibTeXDownload |
| 30 | Algorithms for the search of amino acid patterns in nucleic acid sequences. Hannu Peltola, Hans Söderlund, Esko Ukkonen. Nucleic Acids Research (14): 99-107 (1986). Web SearchBibTeXDownload |
| 29 | Timestamped Term Representation for Implementing Prolog. Heikki Mannila, Esko Ukkonen. SLP 1986, 159-165. Cited by 7Web SearchBibTeX |
| 1985 |
| 28 | Algorithms for Approximate String Matching. Esko Ukkonen. Information and Control (64): 100-118 (1985). Web SearchBibTeXDownload |
| 27 | Upper Bounds on the Size of LR(k) Parsers. Esko Ukkonen. Inf. Process. Lett. (20): 99-103 (1985). Web SearchBibTeXDownload |
| 26 | Finding Approximate Patterns in Strings. Esko Ukkonen. J. Algorithms (6): 132-137 (1985). Web SearchBibTeXDownload |
| 1984 |
| 25 | Finding Temporary Terms in Prolog Programs. Pentti Vataja, Esko Ukkonen. FGCS 1984, 275-282. Web SearchBibTeX |
| 24 | A Simple Linear-Time Algorithm for in Situ Merging. Heikki Mannila, Esko Ukkonen. Inf. Process. Lett. (18): 203-208 (1984). Cited by 35Web SearchBibTeXDownload |
| 23 | SEQAID: a DNA sequence assembling program based on a mathematical model. Hannu Peltola, Hans Söderlund, Esko Ukkonen. Nucleic Acids Research (12): 307-321 (1984). Web SearchBibTeXDownload |
| 1983 |
| 22 | Exponential Lower Bounds for Some NP-Complete Problems in a Restricted Linear Decision Tree Model. Esko Ukkonen. BIT (23): 181-192 (1983). Web SearchBibTeX |
| 21 | On Approximate String Matching. I. Sadeh. FCT 1983, 487-495. Web SearchBibTeXDownload |
| 20 | Algorithms for Some String Matching Problems Arising in Molecular Genetics. Hannu Peltola, Hans Söderlund, Jorma Tarhio, Esko Ukkonen. IFIP Congress 1983, 59-64. Web SearchBibTeX |
| 19 | The Complexity of LALR(k) Testing. Seppo Sippu, Eljas Soisalon-Soininen, Esko Ukkonen. J. ACM (30): 259-270 (1983). Web SearchBibTeXDownload |
| 18 | Lower Bounds on the Size of Deterministic Parsers. Esko Ukkonen. J. Comput. Syst. Sci. (26): 153-170 (1983). Web SearchBibTeXDownload |
| 17 | Two Results on Polynomial Time Truth-Table Reductions to Sparse Sets. Esko Ukkonen. SIAM J. Comput. (12): 580-587 (1983). Web SearchBibTeXDownload |
| 1982 |
| 16 | The equivalence problem for some non-real-time deterministic pushdown automata. Esko Ukkonen. J. ACM (29): 1166-1181 (1982). Web SearchBibTeXDownload |
| 15 | Structure Preserving Elimination of Null Productions from Context-Free Grammars. Esko Ukkonen. Theor. Comput. Sci. (17): 43-54 (1982). Web SearchBibTeXDownload |
| 1981 |
| 14 | On the calculation of the effects of roundoff errors. Esko Ukkonen. ACM Trans. Math. Softw. (7): 259-271 (1981). Web SearchBibTeXDownload |
| 13 | On Size Bounds for Deterministic Parsers. Esko Ukkonen. ICALP 1981, 218-228. Web SearchBibTeXDownload |
| 12 | Minimizing the Number of Evaluation Passes for Attribute Grammars. Kari-Jouko Räihä, Esko Ukkonen. SIAM J. Comput. (10): 772-786 (1981). Web SearchBibTeXDownload |
| 11 | LALR(k) Testing is PSPACE-Complete. Esko Ukkonen, Eljas Soisalon-Soininen. STOC 1981, 202-206. Web SearchBibTeXDownload |
| 10 | The Shortest Common Supersequence Problem over Binary Alphabet is NP-Complete. Kari-Jouko Räihä, Esko Ukkonen. Theor. Comput. Sci. (16): 187-198 (1981). Web SearchBibTeXDownload |
| 1980 |
| 9 | On the Optimal Assignment of Attributes to Passes in Multi-Pass Attribute Evaluators. Kari-Jouko Räihä, Esko Ukkonen. ICALP 1980, 500-511. Web SearchBibTeXDownload |
| 8 | Balancing Syntactic and Semantic Power in Compiler Specification. Kari-Jouko Räihä, Esko Ukkonen. IFIP Congress 1980, 65-70. Web SearchBibTeX |
| 7 | A Decision Method for the Equivalence of some Non-Real-Time Deterministic Pushdown Automata. Esko Ukkonen. STOC 1980, 29-38. Web SearchBibTeXDownload |
| 1979 |
| 6 | A Method for Transforming Grammars into LL(k) Form. Eljas Soisalon-Soininen, Esko Ukkonen. Acta Inf. (12): 339-369 (1979). Web SearchBibTeXDownload |
| 5 | A Modification of the LR(k) Method for Constructing Compact Bottom-Up Parsers. Esko Ukkonen. ICALP 1979, 646-658. Web SearchBibTeXDownload |
| 4 | The Nonexistence of Some Covering Context-Free Grammars. Esko Ukkonen. Inf. Process. Lett. (8): 187-192 (1979). Web SearchBibTeXDownload |
| 3 | Remarks on the Nonexistence of some Covering Grammars. Esko Ukkonen. Theoretical Computer Science 1979, 298-309. Web SearchBibTeXDownload |
| 1978 |
| 2 | Tranformations to Produce Certain Covering Grammars. Esko Ukkonen. MFCS 1978, 516-525. Web SearchBibTeXDownload |
| 1976 |
| 1 | A Characterization of LL(k) Languages. Eljas Soisalon-Soininen, Esko Ukkonen. ICALP 1976, 20-30. Web SearchBibTeX |