2013
75Design of a large-scale storage-class RRAM system. Myoungsoo Jung, John Shalf, Mahmut T. Kandemir. ICS 2013, 103-114. Web SearchBibTeXDownload
2012
74Toward codesign in high performance computing systems. Richard F. Barrett, Xiaobo Sharon Hu, Sudip S. Dosanjh, S. Parker, Michael A. Heroux, John Shalf. ICCAD 2012, 443-449. Web SearchBibTeXDownload
73NANDFlashSim: Intrinsic latency variation aware NAND flash memory system modeling and simulation at microarchitecture level. Myoungsoo Jung, Ellis Herbert Wilson, David Donofrio, John Shalf, Mahmut T. Kandemir. MSST 2012, 1-12. Web SearchBibTeXDownload
72Optimization of geometric multigrid for emerging multi- and manycore processors. Samuel Williams, Dhiraj D. Kalamkar, Amik Singh, Anand M. Deshpande, Brian van Straalen, Mikhail Smelyanskiy, Ann S. Almgren, Pradeep Dubey, John Shalf, Leonid Oliker. SC 2012, 96. Web SearchBibTeXDownload
71Billion-particle SIMD-friendly two-point correlation on large-scale HPC cluster systems. Jatin Chhugani, Changkyu Kim, Hemant Shukla, Jongsoo Park, Pradeep Dubey, John Shalf, Horst D. Simon. SC 2012, 1. Web SearchBibTeXDownload
70The Analysis of Impact of Energy Efficiency Requirements on Programming Environments. John Shalf. SC Companion 2012, 920-941. Web SearchBibTeXDownload
69A preliminary evaluation of the hardware acceleration of the Cray Gemini interconnect for PGAS languages and comparison with MPI. Hongzhang Shan, Nicholas J. Wright, John Shalf, Katherine A. Yelick, Marcus Wagner, Nathan Wichmann. SIGMETRICS Performance Evaluation Review (40): 92-98 (2012). Web SearchBibTeXDownload
2011
68Green Flash: Climate Machine (LBNL). John Shalf, David Donofrio, Chris Rowen, Leonid Oliker, Michael F. Wehner. Encyclopedia of Parallel Computing 2011, 809-819. Web SearchBibTeXDownload
67Rethinking Hardware-Software Codesign for Exascale Systems. John Shalf, Dan Quinlan, Curtis Janssen. IEEE Computer (44): 22-30 (2011). Web SearchBibTeXDownload
66The International Exascale Software Project roadmap. Jack Dongarra, Peter H. Beckman, Terry Moore, Patrick Aerts, Giovanni Aloisio, Jean-Claude Andre, David Barkai, Jean-Yves Berthou, Taisuke Boku, Bertrand Braunschweig, Franck Cappello, Barbara M. Chapman, Xuebin Chi, Alok N. Choudhary, Sudip S. Dosanjh, Thom H. Dunning, Sandro Fiore, Al Geist, Bill Gropp, Robert J. Harrison, Mark Hereld, Michael A. Heroux, Adolfy Hoisie, Koh Hotta, Zhong Jin, Yutaka Ishikawa, Fred Johnson, Sanjay Kale, Richard Kenway, David E. Keyes, Bill Kramer, Jesús Labarta, Alain Lichnewsky, Thomas Lippert, Bob Lucas, Barney Maccabe, Satoshi Matsuoka, Paul Messina, Peter Michielse, Bernd Mohr, Matthias S. Müller, Wolfgang E. Nagel, Hiroshi Nakashima, Michael E. Papka, Daniel A. Reed, Mitsuhisa Sato, Edward Seidel, John Shalf, David Skinner, Marc Snir, Thomas L. Sterling, Rick Stevens, Fred Streitz, Bob Sugar, Shinji Sumimoto, William Tang, John Taylor, Rajeev Thakur, Anne E. Trefethen, Mateo Valero, Aad van der Steen, Jeffrey S. Vetter, Peg Williams, Robert W. Wisniewski, Katherine A. Yelick. IJHPCA (25): 3-60 (2011). Web SearchBibTeXDownload
65Let there be light!: the future of memory systems is photonics and 3D stacking. Keren Bergman, Gilbert Hendry, Paul Hargrove, John Shalf, Bruce Jacob, K. Scott Hemmert, Arun Rodrigues, David Resnick. MSPC 2011, 43-48. Web SearchBibTeXDownload
64Gyrokinetic toroidal simulations on leading multi- and manycore HPC systems. Kamesh Madduri, Khaled Z. Ibrahim, Samuel Williams, Eun-Jin Im, Stéphane Ethier, John Shalf, Leonid Oliker. SC 2011, 23. Web SearchBibTeXDownload
63Extracting ultra-scale Lattice Boltzmann performance via hierarchical and distributed auto-tuning. Samuel Williams, Leonid Oliker, Jonathan Carter, John Shalf. SC 2011, 55. Web SearchBibTeXDownload
62Multithreaded global address space communication techniques for gyrokinetic fusion applications on ultra-scale platforms. Robert Preissl, Nathan Wichmann, Bill Long, John Shalf, Stéphane Ethier, Alice E. Koniges. SC 2011, 15. Web SearchBibTeXDownload
61Hardware/software co-design for energy-efficient seismic modeling. Jens Krueger, David Donofrio, John Shalf, Marghoob Mohiyuddin, Samuel Williams, Leonid Oliker, Franz-Josef Pfreund. SC 2011, 73. Web SearchBibTeXDownload
2010
60Performance Analysis of High Performance Computing Applications on the Amazon Web Services Cloud. Keith R. Jackson, Lavanya Ramakrishnan, Krishna Muriki, Shane Canon, Shreyas Cholia, John Shalf, Harvey J. Wasserman, Nicholas J. Wright. CloudCom 2010, 159-168. Web SearchBibTeXDownload
59Silicon Nanophotonic Network-on-Chip Using TDM Arbitration. Gilbert Hendry, Johnnie Chan, Shoaib Kamil, Leonid Oliker, John Shalf, Luca P. Carloni, Keren Bergman. Hot Interconnects 2010, 88-95. Web SearchBibTeXDownload
58Communication Requirements and Interconnect Optimization for High-End Scientific Applications. Shoaib Kamil, Leonid Oliker, Ali Pinar, John Shalf. IEEE Trans. Parallel Distrib. Syst. (21): 188-202 (2010). Web SearchBibTeXDownload
57An auto-tuning framework for parallel multicore stencil computations. Shoaib Kamil, Cy Chan, Leonid Oliker, John Shalf, Samuel Williams. IPDPS 2010, 1-12. Web SearchBibTeXDownload
56Parallel I/O performance: From events to ensembles. Andrew Uselton, Mark Howison, Nicholas J. Wright, David Skinner, Noel Keen, John Shalf, Karen L. Karavanic, Leonid Oliker. IPDPS 2010, 1-11. Web SearchBibTeXDownload
55Defining future platform requirements for e-Science clouds. Lavanya Ramakrishnan, Keith R. Jackson, Shane Canon, Shreyas Cholia, John Shalf. SoCC 2010, 101-106. Web SearchBibTeXDownload
54Exascale Computing Technology Challenges. John Shalf, Sudip S. Dosanjh, John Morrison. VECPAR 2010, 1-25. Web SearchBibTeXDownload
2009
53Improving Memory Subsystem Performance Using ViVA: Virtual Vector Architecture. Joseph Gebis, Leonid Oliker, John Shalf, Samuel Williams, Katherine A. Yelick. ARCS 2009, 146-158. Web SearchBibTeXDownload
52Energy-Efficient Computing for Extreme-Scale Science. David Donofrio, Leonid Oliker, John Shalf, Michael F. Wehner, Chris Rowen, Jens Krueger, Shoaib Kamil, Marghoob Mohiyuddin. IEEE Computer (42): 62-71 (2009). Web SearchBibTeXDownload
51Scalability challenges for massively parallel AMR applications. Brian van Straalen, John Shalf, Terry J. Ligocki, Noel Keen, Woo-Sun Yang. IPDPS 2009, 1-12. Web SearchBibTeXDownload
50Optimization of a lattice Boltzmann computation on state-of-the-art multicore platforms. Samuel Williams, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick. J. Parallel Distrib. Comput. (69): 762-777 (2009). Web SearchBibTeXDownload
49Analysis of photonic networks for a chip multiprocessor using scientific applications. Gilbert Hendry, Shoaib Kamil, Aleksandr Biberman, Johnnie Chan, Benjamin G. Lee, Marghoob Mohiyuddin, Ankit Jain, Keren Bergman, Luca P. Carloni, John Kubiatowicz, Leonid Oliker, John Shalf. NOCS 2009, 104-113. Web SearchBibTeXDownload
48HPC global file system performance analysis using a scientific-application derived benchmark. Julian Borrill, Leonid Oliker, John Shalf, Hongzhang Shan, Andrew Uselton. Parallel Computing (35): 358-373 (2009). Web SearchBibTeXDownload
47Optimization of sparse matrix-vector multiplication on emerging multicore platforms. Samuel Williams, Leonid Oliker, Richard W. Vuduc, John Shalf, Katherine A. Yelick, James Demmel. Parallel Computing (35): 178-194 (2009). Web SearchBibTeXDownload
46A Comparison of Different Communication Structures for Scalable Parallel Three Dimensional FFTs in First Principles Codes. A. Canning, John Shalf, L.-W. Wang, Harvey J. Wasserman, M. Gajbe. PARCO 2009, 107-116. Web SearchBibTeXDownload
45A design methodology for domain-optimized power-efficient supercomputing. Marghoob Mohiyuddin, Mark Murphy, Leonid Oliker, John Shalf, John Wawrzynek, Samuel Williams. SC 2009. Web SearchBibTeXDownload
44Memory-efficient optimization of Gyrokinetic particle-to-grid interpolation for multicore processors. Kamesh Madduri, Samuel Williams, Stéphane Ethier, Leonid Oliker, John Shalf, Erich Strohmaier, Katherine A. Yelick. SC 2009. Web SearchBibTeXDownload
43Optimization and Performance Modeling of Stencil Computations on Modern Microprocessors. Kaushik Datta, Shoaib Kamil, Samuel Williams, Leonid Oliker, John Shalf, Katherine A. Yelick. SIAM Review (51): 129-159 (2009). Web SearchBibTeXDownload
2008
42Towards Ultra-High Resolution Models of Climate and Weather. Michael Wehner, Leonid Oliker, John Shalf. IJHPCA (22): 149-165 (2008). Web SearchBibTeXDownload
41Scientific Application Performance On Leading Scalar and Vector Supercomputering Platforms. Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, Stéphane Ethier. IJHPCA (22): 5-20 (2008). Web SearchBibTeXDownload
40Power efficiency in high performance computing. Shoaib Kamil, John Shalf, Erich Strohmaier. IPDPS 2008, 1-8. Web SearchBibTeXDownload
39Lattice Boltzmann simulation optimization on leading multicore platforms. Samuel Williams, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick. IPDPS 2008, 1-14. Web SearchBibTeXDownload
38Characterizing and predicting the I/O performance of HPC applications using a parameterized synthetic benchmark. Hongzhang Shan, Katie Antypas, John Shalf. SC 2008, 42. Web SearchBibTeXDownload
37Stencil computation optimization and auto-tuning on state-of-the-art multicore architectures. Kaushik Datta, Mark Murphy, Vasily Volkov, Samuel Williams, Jonathan Carter, Leonid Oliker, David A. Patterson, John Shalf, Katherine A. Yelick. SC 2008, 4. Web SearchBibTeXDownload
2007
36Reconfigurable hybrid interconnection for static and dynamic scientific applications. Shoaib Kamil, Ali Pinar, Daniel Gunter, Michael Lijewski, Leonid Oliker, John Shalf. Conf. Computing Frontiers 2007, 183-194. Web SearchBibTeXDownload
35Cactus Framework: Black Holes to Gamma Ray Bursts. Erik Schnetter, Christian Ott, Gabrielle Allen, Peter Diener, Tom Goodale, Thomas Radke, Edward Seidel, John Shalf. CoRR (abs/0707.1607) (2007). Web SearchBibTeXDownload
34Scientific Computing Kernels on the Cell Processor. Samuel Williams, John Shalf, Leonid Oliker, Shoaib Kamil, Parry Husbands, Katherine A. Yelick. International Journal of Parallel Programming (35): 263-298 (2007). Web SearchBibTeXDownload
33Scientific Application Performance on Candidate PetaScale Platforms. Leonid Oliker, Andrew Canning, Jonathan Carter, Costin Iancu, Michael Lijewski, Shoaib Kamil, John Shalf, Hongzhang Shan, Erich Strohmaier, Stéphane Ethier, Tom Goodale. IPDPS 2007, 1-12. Web SearchBibTeXDownload
32Optimization of sparse matrix-vector multiplication on emerging multicore platforms. Samuel Williams, Leonid Oliker, Richard W. Vuduc, John Shalf, Katherine A. Yelick, James Demmel. SC 2007, 38. Web SearchBibTeXDownload
31Investigation of leading HPC I/O performance using a scientific-application derived benchmark. Julian Borrill, Leonid Oliker, John Shalf, Hongzhang Shan. SC 2007, 10. Web SearchBibTeXDownload
2006
30The potential of the cell processor for scientific computing. Samuel Williams, John Shalf, Leonid Oliker, Shoaib Kamil, Parry Husbands, Katherine A. Yelick. Conf. Computing Frontiers 2006, 9-20. Web SearchBibTeXDownload
29Implicit and explicit optimizations for stencil computations. Shoaib Kamil, Kaushik Datta, Samuel Williams, Leonid Oliker, John Shalf, Katherine A. Yelick. Memory System Performance and Correctness 2006, 51-60. Web SearchBibTeXDownload
28HDF5-FastQuery: Accelerating Complex Queries on HDF Datasets using Fast Bitmap Indices. Luke J. Gosink, John Shalf, Kurt Stockinger, Kesheng Wu, Wes Bethel. SSDBM 2006, 149-158. Web SearchBibTeXDownload
27Performance Evaluation of Scientific Applications on Modern Parallel Vector Systems. Jonathan Carter, Leonid Oliker, John Shalf. VECPAR 2006, 490-503. Web SearchBibTeXDownload
2005
26Performance evaluation of the SX-6 vector architecture for scientific computations. Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, David Skinner, Stéphane Ethier, Rupak Biswas, M. Jahed Djomehri, Rob F. Van der Wijngaart. Concurrency - Practice and Experience (17): 69-93 (2005). Web SearchBibTeXDownload
25The Astrophysics Simulation Collaboratory Portal: a framework for effective distributed research. Ruxandra Bondarescu, Gabrielle Allen, Greg Daues, Ian Kelley, Michael Russell, Edward Seidel, John Shalf, Malcolm Tobias. Future Generation Comp. Syst. (21): 259-270 (2005). Web SearchBibTeXDownload
24Query-Driven Visualization of Large Data Sets. Kurt Stockinger, John Shalf, Kesheng Wu, E. Wes Bethel. IEEE Visualization 2005, 22. Web SearchBibTeXDownload
23Impact of modern memory subsystems on cache optimizations for stencil computations. Shoaib Kamil, Parry Husbands, Leonid Oliker, John Shalf, Katherine A. Yelick. Memory System Performance 2005, 36-43. Web SearchBibTeXDownload
22Analyzing Ultra-Scale Application Communication Requirements for a Reconfigurable Hybrid Interconnect. John Shalf, Shoaib Kamil, Leonid Oliker, David Skinner. SC 2005, 17. Web SearchBibTeXDownload
21DEX: Increasing the Capability of Scientific Data Analysis Pipelines by Using Efficient Bitmap Indices to Accelerate Scientific Visualization. Kurt Stockinger, John Shalf, E. Wes Bethel, Kesheng Wu. SSDBM 2005, 35-44. Web SearchBibTeX
2004
20Identifying Performance Bottlenecks on Modern Microarchitectures Using an Adaptable Probe. Gorden Griem, Leonid Oliker, John Shalf, Katherine A. Yelick. IPDPS 2004. Web SearchBibTeXDownload
19Scientific Computations on Modern Parallel Vector Systems. Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, Stéphane Ethier. SC 2004, 10. Web SearchBibTeXDownload
2003
18Deploying Web-Based Visual Exploration Tools on the Grid. T. J. Jankun-Kelly, Oliver Kreylos, Kwan-Liu Ma, Bernd Hamann, Kenneth I. Joy, John Shalf, E. Wes Bethel. IEEE Computer Graphics and Applications (23): 40-50 (2003). Web SearchBibTeXDownload
17The Grid and Future Visualization System Architectures. John Shalf, E. Wes Bethel. IEEE Computer Graphics and Applications (23): 6-9 (2003). Web SearchBibTeXDownload
16Grid-Distributed Visualizations Using Connectionless Protocols. E. Wes Bethel, John Shalf. IEEE Computer Graphics and Applications (23): 51-59 (2003). Web SearchBibTeXDownload
15Parallel Cell Projection Rendering of Adaptive Mesh Refinement Data. Gunther H. Weber, Martin Öhler, Oliver Kreylos, John Shalf, E. Wes Bethel, Bernd Hamann, Gerik Scheuermann. IEEE Symposium on Parallel and Large-Data Visualization and Graphics 2003, 51-60. Web SearchBibTeX
14Interoperability of Visualization Software and Data Models is NOT an Achievable Goal. E. Wes Bethel, Greg Abram, John Shalf, Randy Frank, James P. Ahrens, Steve Parker, Nagiza F. Samatova, Mark Miller. IEEE Visualization 2003, 607-610. Web SearchBibTeXDownload
13Enabling Applications on the Grid: A Gridlab Overview. Gabrielle Allen, Tom Goodale, Thomas Radke, Michael Russell, Edward Seidel, Kelly Davis, Konstantinos Dolkas, Nikolaos D. Doulamis, Thilo Kielmann, André Merzky, Jarek Nabrzyski, Juliusz Pukacki, John Shalf, Ian J. Taylor. IJHPCA (17): 449-466 (2003). Web SearchBibTeXDownload
12Evaluation of Cache-based Superscalar and Cacheless Vector Architectures for Scientific Computations. Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, David Skinner, Stéphane Ethier, Rupak Biswas, M. Jahed Djomehri, Rob F. Van der Wijngaart. SC 2003, 38. Web SearchBibTeXDownload
2002
11The Astrophysics Simulation Collaboratory: A Science Portal Enabling Community Software Development. Michael Russell, Gabrielle Allen, Greg Daues, Ian T. Foster, Edward Seidel, Jason Novotny, John Shalf, Gregor von Laszewski. Cluster Computing (5): 297-304 (2002). Cited by 69Web SearchBibTeXDownload
10Community software development with the Astrophysics Simulation Collaboratory. Gregor von Laszewski, Michael Russell, Ian T. Foster, John Shalf, Gabrielle Allen, Greg Daues, Jason Novotny, Edward Seidel. Concurrency and Computation: Practice and Experience (14): 1289-1301 (2002). Cited by 13Web SearchBibTeXDownload
9GridLab: Enabling Applications on the Grid. Gabrielle Allen, Dave Angulo, Tom Goodale, Thilo Kielmann, André Merzky, Jarek Nabrzyski, Juliusz Pukacki, Michael Russell, Thomas Radke, Edward Seidel, John Shalf, Ian J. Taylor. GRID 2002, 39-45. Web SearchBibTeXDownload
8The Cactus Framework and Toolkit: Design and Applications. Tom Goodale, Gabrielle Allen, Gerd Lanfermann, Joan Massó, Thomas Radke, Edward Seidel, John Shalf. VECPAR 2002, 197-227. Web SearchBibTeXDownload
2001
7Cactus Tools for Grid Applications. Gabrielle Allen, Werner Benger, Thomas Dramlitsch, Tom Goodale, Hans-Christian Hege, Gerd Lanfermann, André Merzky, Thomas Radke, Edward Seidel, John Shalf. Cluster Computing (4): 179-188 (2001). Web SearchBibTeXDownload
6The Astrophysics Simulation Collaboratory Portal: A Science Portal Enabling Community Software Development. Michael Russell, Gabrielle Allen, Greg Daues, Ian T. Foster, Edward Seidel, Jason Novotny, John Shalf, Gregor von Laszewski. HPDC 2001, 207-215. Web SearchBibTeXDownload
5The Cactus Worm: Experiments with Dynamic Resource Discovery and Allocation in a Grid Environment. Gabrielle Allen, David Angulo, Ian T. Foster, Gerd Lanfermann, Chuang Liu, Thomas Radke, Edward Seidel, John Shalf. IJHPCA (15): 345-358 (2001). Cited by 131Web SearchBibTeXDownload
4High-quality Volume Rendering of Adaptive Mesh Refinement Data. Gunther H. Weber, Oliver Kreylos, Terry J. Ligocki, John Shalf, Hans Hagen, Bernd Hamann, Kenneth I. Joy, Kwan-Liu Ma. VMV 2001, 121-128. Web SearchBibTeXDownload
2000
3The Cactus Code: A Problem Solving Environment for the Grid. Gabrielle Allen, Werner Benger, Tom Goodale, Hans-Christian Hege, Gerd Lanfermann, André Merzky, Thomas Radke, Edward Seidel, John Shalf. HPDC 2000, 253. Web SearchBibTeXDownload
1999
2Solving Einstein's Equations on Supercomputers. Gabrielle Allen, Tom Goodale, Gerd Lanfermann, Thomas Radke, Edward Seidel, Werner Benger, Hans-Christian Hege, André Merzky, Joan Massó, John Shalf. IEEE Computer (32): 52-58 (1999). Web SearchBibTeXDownload
1Numerical Relativity in a Distributed Environment. Werner Benger, Ian T. Foster, Jason Novotny, Edward Seidel, John Shalf, Warren Smith, Paul Walker. PPSC 1999. Cited by 41Web SearchBibTeX
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