| 2010 |
|---|
| 8 | SBRML: a markup language for associating systems biology data with models. Joseph O. Dada, Irena Spasic, Norman W. Paton, Pedro Mendes. Bioinformatics (26): 932-938 (2010). Web SearchBibTeXDownload |
| 7 | Systematic integration of experimental data and models in systems biology. Peter Li, Joseph O. Dada, Daniel Jameson, Irena Spasic, Neil Swainston, Kathleen Carroll, Warwick B. Dunn, Farid Khan, Naglis Malys, Hanan L. Messiha, Evangelos Simeonidis, Dieter Weichart, Catherine Winder, Jill Wishart, David S. Broomhead, Carole A. Goble, Simon J. Gaskell, Douglas B. Kell, Hans V. Westerhoff, Pedro Mendes, Norman W. Paton. BMC Bioinformatics (11): 582 (2010). Web SearchBibTeXDownload |
| 6 | Integrative Information Management for Systems Biology. Neil Swainston, Daniel Jameson, Peter Li, Irena Spasic, Pedro Mendes, Norman W. Paton. DILS 2010, 164-178. Web SearchBibTeXDownload |
| 2006 |
|---|
| 5 | COPASI - a COmplex PAthway SImulator. Stefan Hoops, Sven Sahle, Ralph Gauges, Christine Lee, Jürgen Pahle, Natalia Simus, Mudita Singhal, Liang Xu, Pedro Mendes, Ursula Kummer. Bioinformatics (22): 3067-3074 (2006). Web SearchBibTeXDownload |
| 4 | Simulation of biochemical networks using COPASI: a complex pathway simulator. Sven Sahle, Ralph Gauges, Jürgen Pahle, Natalia Simus, Ursula Kummer, Stefan Hoops, Christine Lee, Mudita Singhal, Liang Xu, Pedro Mendes. Winter Simulation Conference 2006, 1698-1706. Web SearchBibTeXDownload |
| 3 | Challenges for modeling and simulation methods in systems biology. Herbert M. Sauro, David Harel, Marta Z. Kwiatkowska, Clifford A. Shaffer, Adelinde M. Uhrmacher, Michael Hucka, Pedro Mendes, Lena Strömbäck, John J. Tyson. Winter Simulation Conference 2006, 1720-1730. Web SearchBibTeXDownload |
| 2003 |
|---|
| 2 | The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Michael Hucka, Andrew Finney, Herbert M. Sauro, H. Bolouri, John C. Doyle, Hiroaki Kitano, Adam P. Arkin, Benjamin J. Bornstein, D. Bray, A. Cornish-Bowden, Autumn A. Cuellar, Serge Dronov, Ernst Dieter Gilles, Martin Ginkel, Victoria Gor, Igor Goryanin, W. J. Hedley, T. Charles Hodgman, J. H. Hofmeyr, Peter J. Hunter, Nick S. Juty, J. L. Kasberger, Andreas Kremling, Ursula Kummer, Nicolas Le Novère, Leslie M. Loew, D. Lucio, Pedro Mendes, E. Minch, Eric Mjolsness, Yoichi Nakayama, M. R. Nelson, Poul M. F. Nielsen, T. Sakurada, James C. Schaff, Bruce E. Shapiro, Thomas Simon Shimizu, Hugh D. Spence, Jörg Stelling, Koichi Takahashi, Masaru Tomita, J. Wagner, J. Wang. Bioinformatics (19): 524-531 (2003). Web SearchBibTeXDownload |
| 2002 |
|---|
| 1 | A Reference Database for Medicago Truncatula Genes, Protiens, and Metabolites. Dianjing Guo, Xingjing Li, Aejaaz Kamal, Olga Brazhnik, Pedro Mendes. CSB 2002, 343. Web SearchBibTeXDownload |
