William R. Hersh

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2011
104Identifying Patients for Clinical Studies from Electronic Health Records: TREC Medical Records Track at OHSU. Steven Bedrick, Kyle H. Ambert, Aaron M. Cohen, William R. Hersh. TREC 2011. Web SearchBibTeXDownload
2010
103Overview of the CLEF 2010 Medical Image Retrieval Track. Henning Müller, Jayashree Kalpathy-Cramer, Ivan Eggel, Steven Bedrick, Joe Reisetter, Charles E. Kahn Jr., William R. Hersh. CLEF (Notebook Papers/LABs/Workshops) 2010. Web SearchBibTeXDownload
102A systematic literature review of automated clinical coding and classification systems. Mary H. Stanfill, Margaret Williams, Susan H. Fenton, Robert A. Jenders, William R. Hersh. JAMIA (17): 646-651 (2010). Web SearchBibTeXDownload
101Unintended consequences of health information technology: A need for biomedical informatics. Elmer V. Bernstam, William R. Hersh, Ida Sim, David Eichmann, Jonathan C. Silverstein, Jack W. Smith, Michael J. Becich. Journal of Biomedical Informatics (43): 828-830 (2010). Web SearchBibTeXDownload
100Multimodal medical image retrieval: image categorization to improve search precision. Jayashree Kalpathy-Cramer, William R. Hersh. Multimedia Information Retrieval 2010, 165-174. Web SearchBibTeXDownload
2009
99Evaluation of a gene information summarization system by users during the analysis process of microarray datasets. Jianji Yang, Aaron M. Cohen, William R. Hersh. BMC Bioinformatics (10) (2009). Web SearchBibTeXDownload
98A stimulus to define informatics and health information technology. William R. Hersh. BMC Med. Inf. & Decision Making (9): 24 (2009). Web SearchBibTeXDownload
97Using Media Fusion and Domain Dimensions to Improve Precision in Medical Image Retrieval. Saïd Radhouani, Jayashree Kalpathy-Cramer, Steven Bedrick, Brian Bakke, William R. Hersh. CLEF (2) 2009, 223-230. Web SearchBibTeXDownload
96Overview of the CLEF 2009 Medical Image Retrieval Track. Henning Müller, Jayashree Kalpathy-Cramer, Ivan Eggel, Steven Bedrick, Saïd Radhouani, Brian Bakke, Charles E. Kahn Jr., William R. Hersh. CLEF (2) 2009, 72-84. Web SearchBibTeXDownload
95TREC genomics special issue overview. William R. Hersh, Ellen M. Voorhees. Inf. Retr. (12): 1-15 (2009). Cited by 1Web SearchBibTeXDownload
94Tasks, topics and relevance judging for the TREC Genomics Track: five years of experience evaluating biomedical text information retrieval systems. Phoebe M. Roberts, Aaron M. Cohen, William R. Hersh. Inf. Retr. (12): 81-97 (2009). Web SearchBibTeXDownload
93Research Paper: Predictors of Student Success in Graduate Biomedical Informatics Training: Introductory Course and Program Success. Irmgard Willcockson, Craig W. Johnson, William R. Hersh, Elmer V. Bernstam. JAMIA (16): 837-846 (2009). Web SearchBibTeXDownload
92Research Paper: Usability Testing Finds Problems for Novice Users of Pediatric Portals. Maria T. Britto, Holly B. Jimison, Jennifer Knopf Munafo, Jennifer Wissman, Michelle L. Rogers, William R. Hersh. JAMIA (16): 660-669 (2009). Web SearchBibTeXDownload
91The ImageCLEFmed Medical Image Retrieval Task Test Collection. William R. Hersh, Henning Müller, Jayashree Kalpathy-Cramer. J. Digital Imaging (22): 648-655 (2009). Web SearchBibTeXDownload
2008
90Overview of the ImageCLEFmed 2008 Medical Image Retrieval Task. Henning Müller, Jayashree Kalpathy-Cramer, Charles E. Kahn Jr., William Hatt, Steven Bedrick, William R. Hersh. CLEF 2008, 512-522. Web SearchBibTeXDownload
89Multimodal Medical Image Retrieval OHSU at ImageCLEF 2008. Jayashree Kalpathy-Cramer, Steven Bedrick, William Hatt, William R. Hersh. CLEF 2008, 744-751. Web SearchBibTeXDownload
88Using Medline Queries to Generate Image Retrieval Tasks for Benchmarking. Henning Müller, Jayashree Kalpathy-Cramer, William R. Hersh, Antoine Geissbühler. MIE 2008, 523-528. Web SearchBibTeXDownload
87Effectiveness of global features for automatic medical image classification and retrieval - The experiences of OHSU at ImageCLEFmed. Jayashree Kalpathy-Cramer, William R. Hersh. Pattern Recognition Letters (29): 2032-2038 (2008). Web SearchBibTeXDownload
86The MERG Suite: Tools for discovering competencies and associated learning resources. Ravi Teja Bhupatiraju, William R. Hersh, Valerie Smothers, Michael Fordis, Peter S. Greene. Source Code for Biology and Medicine (3) (2008). Web SearchBibTeXDownload
2007
85Medical Image Retrieval and Automatic Annotation: OHSU at ImageCLEF 2007. Jayashree Kalpathy-Cramer, William R. Hersh. CLEF 2007, 623-630. Web SearchBibTeXDownload
84Overview of the ImageCLEFmed 2007 Medical Retrieval and Medical Annotation Tasks. Henning Müller, Thomas Deselaers, Thomas Martin Deserno, Jayashree Kalpathy-Cramer, Eugene Kim, William R. Hersh. CLEF 2007, 472-491. Web SearchBibTeXDownload
83Educating 10, 000 informaticians by 2010: The AMIA 10 × 10 program. William R. Hersh, Jeffrey Williamson. I. J. Medical Informatics (76): 377-382 (2007). Web SearchBibTeXDownload
82Reviewer merits. Gary Marchionini, Tefko Saracevic, Jack Carroll, Donald H. Kraft, William R. Hersh, Josiane Mothe, Justin Zobel, Peter Hernon, Candy Schwartz. Inf. Process. Manage. (43): 1-2 (2007). Cited by 1Web SearchBibTeXDownload
81Research paper: A Day in the Life of PubMed: Analysis of a Typical Day's Query Log. Jorge R. Herskovic, Len Y. Tanaka, William R. Hersh, Elmer V. Bernstam. JAMIA (14): 212-220 (2007). Web SearchBibTeXDownload
80Automatic Image Modality Based Classification and Annotation to Improve Medical Image Retrieval. Jayashree Kalpathy-Cramer, William R. Hersh. MedInfo 2007, 1334-1338. Web SearchBibTeXDownload
79Analyzing Web Log Files of the Health On the Net HONmedia Search Engine to Define Typical Image Search Tasks for Image Retrieval Evaluation. Henning Müller, Célia Boyer, Arnaud Gaudinat, William R. Hersh, Antoine Geissbühler. MedInfo 2007, 1319-1323. Web SearchBibTeXDownload
78TREC 2007 Genomics Track Overview. William R. Hersh, Aaron M. Cohen, Lynn Ruslen, Phoebe M. Roberts. TREC 2007. Web SearchBibTeXDownload
77The OHSU Biomedical Question Answering System Framework. Aaron M. Cohen, Jianji Yang, Seeger Fisher, Brian Roark, William R. Hersh. TREC 2007. Web SearchBibTeXDownload
2006
76Variation of Relevance Assessments for Medical Image Retrieval. Henning Müller, Paul Clough, William R. Hersh, Antoine Geissbühler. Adaptive Multimedia Retrieval 2006, 232-246. Web SearchBibTeXDownload
75Overview of the ImageCLEFmed 2006 Medical Retrieval and Medical Annotation Tasks. Henning Müller, Thomas Deselaers, Thomas Martin Deserno, Paul Clough, Eugene Kim, William R. Hersh. CLEF 2006, 595-608. Web SearchBibTeXDownload
74Medical Image Retrieval and Automated Annotation: OHSU at ImageCLEF 2006. William R. Hersh, Jayashree Kalpathy-Cramer, Jeffery R. Jensen. CLEF 2006, 660-669. Web SearchBibTeXDownload
73Research Paper: Reducing Workload in Systematic Review Preparation Using Automated Citation Classification. Aaron M. Cohen, William R. Hersh, K. Peterson, Po-Yin Yen. JAMIA (13): 206-219 (2006). Web SearchBibTeXDownload
72Viewpoint Paper: Who are the Informaticians? What We Know and Should Know. William R. Hersh. JAMIA (13): 166-170 (2006). Web SearchBibTeXDownload
71Research Paper: Using Citation Data to Improve Retrieval from MEDLINE. Elmer V. Bernstam, Jorge R. Herskovic, Yindalon Aphinyanaphongs, Constantin F. Aliferis, Madurai G. Sriram, William R. Hersh. JAMIA (13): 96-105 (2006). Web SearchBibTeXDownload
70Model Formulation: Advancing Biomedical Image Retrieval: Development and Analysis of a Test Collection. William R. Hersh, Henning Müller, Jeffery R. Jensen, Jianji Yang, Paul N. Gorman, Patrick Ruch. JAMIA (13): 488-496 (2006). Web SearchBibTeXDownload
69TREC 2006 Genomics Track Overview. William R. Hersh, Aaron M. Cohen, Phoebe M. Roberts, Hari Krishna Rekapalli. TREC 2006. Web SearchBibTeXDownload
68Combining Lexicon Expansion, Information Retrieval, and Cluster-based Ranking for Biomedical Question Answering. Aaron M. Cohen, Jianji Yang, Seeger Fisher, Brian Roark, William R. Hersh. TREC 2006. Web SearchBibTeXDownload
2005
67Evaluation axes for medical image retrieval systems: the imageCLEF experience. Henning Müller, Paul Clough, William R. Hersh, Thomas Deselaers, Thomas Martin Lehmann, Antoine Geissbühler. ACM Multimedia 2005, 1014-1022. Web SearchBibTeXDownload
66Using co-occurrence network structure to extract synonymous gene and protein names from MEDLINE abstracts. Aaron M. Cohen, William R. Hersh, Christopher Dubay, Kent A. Spackman. BMC Bioinformatics (6): 103 (2005). Web SearchBibTeXDownload
65A survey of current work in biomedical text mining. Aaron M. Cohen, William R. Hersh. Briefings in Bioinformatics (6): 57-71 (2005). Web SearchBibTeXDownload
64Evaluation of biomedical text-mining systems: Lessons learned from information retrieval. William R. Hersh. Briefings in Bioinformatics (6): 344-356 (2005). Web SearchBibTeXDownload
63Manual Query Modification and Data Fusion for Medical Image Retrieval. Jeffery R. Jensen, William R. Hersh. CLEF 2005, 673-679. Web SearchBibTeXDownload
62The CLEF 2005 Cross-Language Image Retrieval Track. Paul Clough, Henning Müller, Thomas Deselaers, Michael Grubinger, Thomas Martin Lehmann, Jeffery R. Jensen, William R. Hersh. CLEF 2005, 535-557. Web SearchBibTeXDownload
61Report on the TREC 2004 genomics track. William R. Hersh. SIGIR Forum (39): 21-24 (2005). Web SearchBibTeXDownload
60A Comparison of Techniques for Classification and Ad Hoc Retrieval of Biomedical Documents. Aaron M. Cohen, Jianji Yang, William R. Hersh. TREC 2005. Web SearchBibTeXDownload
59TREC 2005 Genomics Track Overview. William R. Hersh, Aaron M. Cohen, Jianji Yang, Ravi Teja Bhupatiraju, Phoebe M. Roberts, Marti A. Hearst. TREC 2005. Web SearchBibTeXDownload
2004
58Do Clarity Scores for Queries Correlate with User Performance?. Andrew Turpin, William R. Hersh. ADC 2004, 85-91. Web SearchBibTeXDownload
57Distance learning in biomedical informatics. William R. Hersh. eLearn Magazine (2004): 3 (2004). Web SearchBibTeXDownload
56A categorization and analysis of the criticisms of Evidence-Based Medicine. Aaron M. Cohen, P. Zoë Stavri, William R. Hersh. I. J. Medical Informatics (73): 35-43 (2004). Web SearchBibTeXDownload
55Teach Globally, Learn Locally: The 2003 IMIA Working Group on Education Meeting. William R. Hersh, Paul N. Gorman. I. J. Medical Informatics (73): 95-96 (2004). Web SearchBibTeXDownload
54Research Paper: Computerized Physician Order Entry in U.S. Hospitals: Results of a 2002 Survey. Joan S. Ash, Paul N. Gorman, Veena Seshadri, William R. Hersh. JAMIA (11): 95-99 (2004). Web SearchBibTeXDownload
53Report on TREC 2003 genomics track first-year results and future plans. William R. Hersh. SIGIR Forum (38): 69-72 (2004). Web SearchBibTeXDownload
52SIGIR 2003 workshop on text analysis and search for bioinformatics. Eric W. Brown, William R. Hersh, Alfonso Valencia. SIGIR Forum (38): 31-36 (2004). Web SearchBibTeXDownload
51Feature Generation, Feature Selection, Classifiers, and Conceptual Drift for Biomedical Document Triage. Aaron M. Cohen, Ravi Teja Bhupatiraju, William R. Hersh. TREC 2004. Web SearchBibTeXDownload
50TREC 2004 Genomics Track Overview. William R. Hersh, Ravi Teja Bhupatiraju, L. Ross, Aaron M. Cohen, Dale Kraemer, Phoebe Johnson. TREC 2004. Web SearchBibTeXDownload
2003
49Information retrieval: a health and biomedical perspective. William R. Hersh. Inf. Res. (9) (2003). Web SearchBibTeXDownload
48Research Paper: A Pilot Study of Contextual UMLS Indexing to Improve the Precision of Concept-based Representation in XML-structured Clinical Radiology Reports. Yang Huang, Henry J. Lowe, William R. Hersh. JAMIA (10): 580-587 (2003). Web SearchBibTeXDownload
47Phrases, Boosting, and Query Expansion Using External Knowledge Resources for Genomic Information Retrieval. William R. Hersh, Ravi Teja Bhupatiraju, Susan Price. TREC 2003, 503-509. Web SearchBibTeXDownload
46TREC GENOMICS Track Overview. William R. Hersh, Ravi Teja Bhupatiraju. TREC 2003, 14-23. Web SearchBibTeXDownload
2002
45Forum Paper: Does National Regulatory Mandate of Provider Order Entry Portend Greater Benefit Than Risk for Health Care Delivery?: The 2001 ACMI Debate. J. Marc Overhage, Blackford Middleton, Randolph A. Miller, Rita D. Zielstorff, William R. Hersh. JAMIA (9): 199-208 (2002). Web SearchBibTeXDownload
44Research Paper: Factors Associated with Success in Searching MEDLINE and Applying Evidence to Answer Clinical Questions. William R. Hersh, M. Katherine Crabtree, David H. Hickam, Lynetta Sacherek, Charles P. Friedman, Patricia Tidmarsh, Craig Mosbaek, Dale Kraemer. JAMIA (9): 283-293 (2002). Web SearchBibTeXDownload
43Telehealth: The Need for Evaluation Redux. William R. Hersh, Patricia K. Patterson, Dale Kraemer. JAMIA (9): 89-91 (2002). Web SearchBibTeXDownload
42Overcoming impediments to effective health and biomedical digital libraries. William R. Hersh, Jan Velterop, Alexa T. McCray, Gunther Eysenbach, Mark Boguski. JCDL 2002, 360. Web SearchBibTeXDownload
41Text retrieval conference (TREC) genomics pre-track workshop. William R. Hersh. JCDL 2002, 428. Web SearchBibTeXDownload
40Bioinformatics and digital libraries. William R. Hersh, Christopher Dubay. JCDL 2002, 421. Web SearchBibTeXDownload
39User interface effects in past batch versus user experiments. Andrew Turpin, William R. Hersh. SIGIR 2002, 431-432. Web SearchBibTeXDownload
38TREC genomics pre-track workshop report. William R. Hersh. SIGIR Forum (36): 81-82 (2002). Web SearchBibTeXDownload
37More Statistical Power Needed: The OHSU TREC 2002 Interactive Track Experiments. William R. Hersh, Susan Moy, Dale Kraemer, Lynetta Sacherek, Daniel Olson. TREC 2002. Web SearchBibTeXDownload
36TREC 2002 Interactive Track Report. William R. Hersh. TREC 2002. Web SearchBibTeXDownload
2001
35Clinical outcomes resulting from telemedicine interventions: a systematic review. William R. Hersh, Mark Helfand, James Wallace, Dale Kraemer, Patricia K. Patterson, Susan Shapiro, Merwyn Greenlick. BMC Med. Inf. & Decision Making (1): 5 (2001). Web SearchBibTeXDownload
34Challenging conventional assumptions of automated information retrieval with real users: Boolean searching and batch retrieval evaluations. William R. Hersh, Andrew Turpin, Susan Price, Dale Kraemer, Daniel Olson, Benjamin Chan, Lynetta Sacherek. Inf. Process. Manage. (37): 383-402 (2001). Web SearchBibTeXDownload
33Interactivity at the Text Retrieval Conference (TREC). William R. Hersh, Paul Over. Inf. Process. Manage. (37): 365-367 (2001). Web SearchBibTeXDownload
32Managing Gigabytes - Compressing and Indexing Documents and Images (Second Edition). William R. Hersh. Inf. Retr. (4): 79-80 (2001). Web SearchBibTeXDownload
31Application of Information Technology: Implementation and Evaluation of a Medical Informatics Distance Education Program. William R. Hersh, Katherine Junium, Mark Mailhot, Patricia Tidmarsh. JAMIA (8): 570-584 (2001). Web SearchBibTeXDownload
30Selective Automated Indexing of Findings and Diagnoses in Radiology Reports. William R. Hersh, Mark Mailhot, Catherine Arnott-Smith, Henry J. Lowe. Journal of Biomedical Informatics (34): 262-273 (2001). Web SearchBibTeXDownload
29Why Batch and User Evaluations Do Not Give the Same Results. Andrew Turpin, William R. Hersh. SIGIR 2001, 225-231. Web SearchBibTeXDownload
28The TREC 2001 Interactive Track Report. William R. Hersh, Paul Over. TREC 2001. Web SearchBibTeXDownload
27Observations of Searchers: OHSU TREC 2001 Interactive Track. William R. Hersh, Lynetta Sacherek, Daniel Olson. TREC 2001. Web SearchBibTeXDownload
2000
26Electronic Publishing of Scholarly Communication in the Biomedical Sciences. William R. Hersh, Thomas C. Rindfleisch. JAMIA (7): 324-325 (2000). Web SearchBibTeXDownload
25Discussion Forum: Integration and Beyond: Panel Discussion. William W. Stead, Randolph A. Miller, Mark A. Musen, William R. Hersh. JAMIA (7): 146-148 (2000). Web SearchBibTeXDownload
24Review Paper: Integration and Beyond: Linking Information from Disparate Sources and into Workflow. William W. Stead, Randolph A. Miller, Mark A. Musen, William R. Hersh. JAMIA (7): 135-145 (2000). Web SearchBibTeXDownload
23Do batch and user evaluation give the same results?. William R. Hersh, Andrew Turpin, Susan Price, Benjamin Chan, Dale Kraemer, Lynetta Sacherek, Daniel Olson. SIGIR 2000, 17-24. Web SearchBibTeXDownload
22SIGIR Workshop on Interactive Retrieval at TREC and Beyond. William R. Hersh, Paul Over. SIGIR Forum (34): 24-27 (2000). Web SearchBibTeXDownload
21Further Analysis of Whether Batch and User Evaluations Give the Same Results with a Question-Answering Task. William R. Hersh, Andrew Turpin, Lynetta Sacherek, Daniel Olson, Susan Price, Benjamin Chan, Dale Kraemer. TREC 2000. Web SearchBibTeXDownload
20The TREC-9 Interactive Track Report. William R. Hersh, Paul Over. TREC 2000. Web SearchBibTeXDownload
1999
19System and User Attributes Associated with Successful Searching. William R. Hersh, Susan Price, Benjamin Chan, Dale Kraemer, Lynetta Sacherek, Daniel Olson. ADL 1999, 60-70. Web SearchBibTeXDownload
18Model Formulation: A Model for Enhancing Internet Medical Document Retrieval with "Medical Core Metadata". Gary Malet, Felix Munoz, Richard Appleyard, William R. Hersh. JAMIA (6): 163-172 (1999). Web SearchBibTeXDownload
17TREC-8 Interactive Track. William R. Hersh, Paul Over. SIGIR Forum (33): 8-11 (1999). Web SearchBibTeXDownload
16Do Batch and User Evaluations Give the Same Results? An Analysis from the TREC-8 Interactive Track. William R. Hersh, Andrew Turpin, Susan Price, Dale Kraemer, Benjamin Chan, Lynetta Sacherek, Daniel Olson. TREC 1999. Web SearchBibTeXDownload
15TREC-8 Interactive Track Report. William R. Hersh, Paul Over. TREC 1999. Web SearchBibTeXDownload
1998
14Book Review: Rationalizing Medical Work: Decision-Support Techniques and Medical Practices by M. Berg. William R. Hersh. Inf. Process. Manage. (34): 133-134 (1998). Web SearchBibTeXDownload
13A Large-Scale Comparison of Boolean vs. Natural Language Searching for the TREC-7 Interactive Track. William R. Hersh, Susan Price, Dale Kraemer, Benjamin Chan, Lynetta Sacherek, Daniel Olson. TREC 1998, 429-438. Web SearchBibTeX
1997
12A Comparison of Boolean and Natural Language Searching for the TREC-6 Interactive Task. William R. Hersh, Bikram Day. TREC 1997, 585-595. Web SearchBibTeXDownload
1996
11A Task-Oriented Approach to Information Retrieval Evaluation. William R. Hersh, Jeffrey Pentecost, David H. Hickam. JASIS (47): 50-56 (1996). Web SearchBibTeXDownload
1995
10An Evaluation of Interactive Boolean and Natural Language Searching with an Online Medical Textbook. William R. Hersh, David H. Hickam. JASIS (46): 478-489 (1995). Web SearchBibTeXDownload
9Information Retrieval in Medicine: The SAPHIRE Experience. William R. Hersh, David H. Hickam. JASIS (46): 743-747 (1995). Web SearchBibTeXDownload
8Erratum: An Evaluation of Interactive Boolean and Natural Language Searching with an Online Medical Textbook. August 1995 Issue, pages 478-489. William R. Hersh, David H. Hickam. JASIS (46): 719 (1995). Web SearchBibTeX
7Introduction and Overview. Bernard Levrat, Lois F. Lunin. JASIS (46): 726-728 (1995). Web SearchBibTeXDownload
6The Electronic Medical Record: Promises and Problems. William R. Hersh. JASIS (46): 772-776 (1995). Web SearchBibTeXDownload
5Towards New Measures of Information Retrieval Evaluation. William R. Hersh, Diane L. Elliot, David H. Hickam, Stephanie L. Wolf, Anna Molnar, Christine Leichtenstien. SIGIR 1995, 164-170. Web SearchBibTeXDownload
1994
4Relevance and Retrieval Evaluation: Perspectives from Medicine. William R. Hersh. JASIS (45): 201-206 (1994). Web SearchBibTeXDownload
3OHSUMED: An Interactive Retrieval Evaluation and New Large Test Collection for Research. William R. Hersh, Chris Buckley, T. J. Leone, David H. Hickam. SIGIR 1994, 192-201. Web SearchBibTeXDownload
1992
2CLARIT TREC Design, Experiments, and Results. David A. Evans, Robert G. Lefferts, Gregory Grefenstette, Steven K. Handerson, William R. Hersh, Armar A. Archbold. TREC 1992, 251-286. Web SearchBibTeXDownload
1978
1Capacity Planning - SCAPE. William R. Hersh. Int. CMG Conference 1978, 193-198. Web SearchBibTeX
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